Vanilla Bean Creme Brulee Cupcakes

Section: Indulgent Desserts for Sweet Endings

These cupcakes offer a delicate vanilla base wrapped around a smooth cheesecake core, topped with a luscious vanilla custard layer and a crisp caramelized sugar shell. The contrast between the moist cake, creamy filling, and crunchy brulee topping creates a satisfying balance of textures and deep flavors. Easy to prepare with simple techniques, they deliver an elegant treat perfect for any gathering. Best served chilled with freshly torched caramelized sugar for that signature crackly finish.

The combination of soft vanilla sponge and rich cheesecake offers a unique twist on traditional cupcakes, while the brulee topping adds a sophisticated sweetness and texture. These cupcakes freeze well if stored without the caramelized layer, making them as versatile as they are delicious.

A woman wearing a chef's hat and apron.
Published By Maria
Updated as of Sun, 04 Jan 2026 16:28:58 GMT
A cupcake with a caramel sauce drizzle. Bookmark
A cupcake with a caramel sauce drizzle. | foodbymary.com

These Vanilla Bean Creme Brulee Cheesecake Cupcakes combine the comforting softness of a vanilla cupcake with a creamy cheesecake center and a luscious vanilla custard layer, all topped with a signature crispy caramelized sugar shell. This recipe is an elegant treat that delivers delightful contrasts of texture and rich flavor without requiring complicated techniques. Perfect for any celebration or special indulgence, you can make these cupcakes with confidence even if you’re not a seasoned baker.

Why You’ll Love This Vanilla Bean Creme Brulee Cheesecake Cupcakes

  • Elegant presentation that looks professionally made thanks to the smooth custard and crunchy brulee topping
  • Layered flavors from the moist vanilla cake, creamy cheesecake filling, and crispy caramelized sugar topping create a memorable bite
  • Perfect for entertaining or gifting since you can make them ahead and torch the tops just before serving
  • No tricky water bath needed, simplifying the baking process while still delivering moist and creamy results

I first tried these on a holiday gathering and was amazed at how guests kept asking for the recipe. The combination of textures surprises everyone.

Ingredients

  • All-Purpose Flour: provides the structure and tenderness to the vanilla cupcake base sift for fluffiness
  • Granulated Sugar: sweetens the cupcakes and is essential for creating the brulee topping’s caramelized crust
  • Vanilla Bean Paste or Pure Vanilla Extract: infuses deep aromatic vanilla flavor vanilla bean paste adds visual specks and stronger taste
  • Cream Cheese: key for the rich and smooth cheesecake filling choose full-fat for best results
  • Eggs: bind all components together and add richness to the cake and cheesecake layers
  • Butter: adds moisture and buttery flavor to the cupcakes use unsalted to control salt levels
  • Sour Cream: adds creaminess and a slight tang to the cheesecake center enhancing its texture
  • Heavy Cream: used to make the silky vanilla custard layer opt for fresh cream for best texture
  • Powdered Sugar: lightly dusted on top for a delicate finish and complements the brulee crust
  • Brown Sugar or Granulated Sugar (for the brulee topping): caramelizes into the signature crackly golden shell granulated sugar works best for even burning

Step-by-Step Instructions

Make the Vanilla Cupcake Base:
Preheat your oven to the recommended temperature and line a muffin tin with cupcake liners. Cream the butter and granulated sugar together until fluffy to incorporate air and build a light texture. Add eggs one at a time, mixing well after each addition, then stir in vanilla bean paste or extract. Carefully fold in sifted flour and a splash of milk until you have a smooth batter. Fill each cupcake liner halfway with this batter.
Add the Cheesecake Center:
In a separate bowl, blend cream cheese until smooth. Add sugar, vanilla extract, sour cream, and an egg, mixing until the cheesecake filling is creamy and free of lumps. Spoon a generous dollop of this mixture onto the center of each cupcake batter-filled liner.
Bake and Cool:
Bake the cupcakes until they are just golden and a toothpick inserted comes out mostly clean with a few moist crumbs. This prevents overbaking and keeps the cheesecake soft. Allow the cupcakes to cool completely in the pan before moving them to a wire rack and then refrigerate until cold.
Prepare and Add the Custard Layer:
On the stove, whisk together egg yolks, sugar, vanilla, and heavy cream over gentle heat until the mixture thickens into a smooth custard. Cool it slightly at room temperature before spreading a thin layer over each chilled cupcake. Refrigerate again until the custard sets fully.
Torch the Brulee:
Right before serving, sprinkle each custard-topped cupcake generously with granulated sugar. Using a small kitchen torch, caramelize the sugar by moving the flame evenly in circular motions until the sugar melts and forms a crisp, golden shell. Finish with a light dusting of powdered sugar for an elegant touch.
Vanilla bean creme brulee cheesecake cupcakes. Bookmark
Vanilla bean creme brulee cheesecake cupcakes. | foodbymary.com

My favorite part is the burnt sugar crust. It adds a satisfying crispness to each bite that contrasts beautifully with the creamy interior. One family holiday, everyone gathered ‘round the kitchen as I torched the sugar, and those simple moments really made the dessert feel special.

Storage Tips

Store these cupcakes in an airtight container in the fridge for up to three days to keep the custard and cheesecake fresh. Avoid caramelizing the tops in advance or they will soften. If freezing, wrap cupcakes tightly without the custard and sugar layer and thaw completely before adding toppings for the best texture.

Ingredient Substitutions

If you don’t have vanilla bean paste, pure vanilla extract works well. For a dairy-free version, try cream cheese alternatives and coconut cream, but expect slight changes in texture. Use white sugar for the brulee topping for best caramelization, although experimenting with light brown sugar adds a subtle molasses hint.

Serving Suggestions

These cupcakes pair wonderfully with strong coffee like espresso or a mellow dessert wine such as Moscato. Garnishing with fresh berries or edible flowers enhances the elegant presentation. Serve chilled to maintain the custard’s smooth texture and torch the brulee right before guests arrive for maximum crunch.

Cultural and Historical Context

Creme brulee dates back to 17th-century France and is famous for its rich custard and caramelized sugar crust. This recipe reimagines that classic dessert in cupcake form by combining the familiar American cheesecake with vanilla cake and the beloved crisp brulee layer, bridging traditions to create a fresh modern treat.

Pro Tips

  • Warm the egg yolks gently for the custard to prevent curdling and achieve a silky texture
  • Use an ice cream scoop for evenly portioning cupcake batter and cheesecake filling to ensure consistent sizes
  • Don’t rush the brulee torching—move the flame continuously in circles to create a thin, even caramel shell without burning

Common Recipe Questions

→ How do I achieve the perfect caramelized sugar topping?

Use a small kitchen torch to evenly caramelize granulated sugar on top. Move the flame in circular motions quickly to avoid burning and achieve a golden, crisp shell.

→ Can these cupcakes be prepared ahead of time?

Yes, bake and assemble the cupcakes a day in advance. Apply and torch the sugar topping just before serving to maintain crispness.

→ Is there an alternative to using a kitchen torch?

You can briefly broil the cupcakes under high heat in your oven. Watch carefully to prevent burning and ensure even caramelization.

→ Can I substitute vanilla extract for vanilla bean paste?

Vanilla extract works well for flavor, though vanilla bean paste provides a more intense taste and characteristic specks in the custard.

→ Are these cupcakes suitable for freezing?

Yes, freeze them without the custard and caramelized sugar topping. Thaw before adding the final layers for best texture and flavor.

→ Is a water bath necessary for the cheesecake center?

No, this version bakes beautifully without a water bath, simplifying the process and preventing cracking.

Vanilla Brulee Cheesecake Cupcakes

Soft vanilla cupcakes with creamy cheesecake inside and a crisp caramelized sugar topping.

Prep Time
40 minutes
Cooking Time
25 minutes
Complete Time
65 minutes
Published By: Maria

Recipe Category: Desserts

Skill Level: Moderately Challenging

Cuisine Type: American

Total Portions: 12 Serves How Many (Twelve cupcakes)

Dietary Preferences: Vegetarian-Friendly

Required Ingredients

→ Cupcake Base

01 125 grams all-purpose flour
02 150 grams granulated sugar
03 115 grams unsalted butter, softened
04 2 large eggs
05 5 milliliters vanilla bean paste or pure vanilla extract
06 30 milliliters whole milk

→ Cheesecake Center

07 170 grams cream cheese, softened
08 50 grams granulated sugar
09 1 large egg
10 5 milliliters vanilla bean paste or pure vanilla extract
11 30 grams sour cream

→ Custard Layer

12 2 large egg yolks
13 50 grams granulated sugar
14 5 milliliters vanilla bean paste or pure vanilla extract
15 120 milliliters heavy cream

→ Topping

16 Granulated or brown sugar for caramelizing
17 Powdered sugar for dusting

Step-by-Step Instructions

Step 01

Preheat oven to 175°C and line a muffin tin with cupcake liners. Cream butter and granulated sugar until fluffy. Add eggs one at a time, then stir in vanilla. Fold in flour and milk until smooth. Fill each liner halfway with batter.

Step 02

In a separate bowl, beat cream cheese, sugar, egg, vanilla, and sour cream until smooth. Spoon a dollop of cheesecake mixture onto the center of each cupcake batter portion.

Step 03

Bake for 20-25 minutes or until a toothpick inserted near the cheesecake center comes out mostly clean. Cool cupcakes in the pan briefly, then transfer to a wire rack. Refrigerate until completely chilled.

Step 04

Whisk egg yolks, sugar, and vanilla in a heatproof bowl. Heat heavy cream until hot but not boiling. Slowly temper cream into egg mixture while whisking. Return to low heat and cook, stirring, until custard thickens. Let cool slightly.

Step 05

Spread a thin layer of custard atop each chilled cupcake. Refrigerate until custard sets firmly, approximately one hour.

Step 06

Just before serving, sprinkle each custard layer evenly with granulated or brown sugar. Use a small kitchen torch to caramelize the sugar until golden and crisp. Finish with a light dusting of powdered sugar.

Handy Cooking Tips

  1. Use a kitchen torch for precise caramelization and avoid burning by keeping the flame moving.
  2. Cupcakes can be made a day ahead; store chilled and add caramelized sugar topping just prior to serving.
  3. No water bath required; this simplifies preparation and yields excellent texture.

Necessary Kitchen Tools

  • Muffin tin with liners
  • Electric mixer
  • Mixing bowls
  • Ice cream or cookie scoop
  • Small kitchen torch
  • Fine mesh sieve

Allergy Details

Always check ingredient packaging for potential allergens and consult a healthcare professional when in doubt.
  • Contains dairy, eggs, and gluten

Nutritional Information (Per Serving)

These nutrition details are for guidance and don’t replace professional advice.
  • Calories: 370.5
  • Fat: 21.7 grams
  • Carbohydrates: 42.2 grams
  • Proteins: 6.5 grams