
These pumpkin cream cheese muffins are the ultimate fall treat for anyone who craves the cozy flavors of pumpkin and the creamy tang of cheesecake all in one bite. The baked-in swirl of sweet cream cheese brings out the best in these moist muffins, making them perfect for a quick breakfast, snack, or holiday brunch. I never get through October without making at least a few dozen because my whole family insists on it every year.
Ingredients
- All-purpose flour: ensures a light and tender texture look for unbleached if possible and measure by spooning into the cup not scooping from the bag
- Pumpkin puree: gives gorgeous color flavor and moisture use pure pumpkin not pie filling for best results
- Granulated sugar and light brown sugar: create a balanced sweetness and rich crumb the combo gives a nice tender bite
- Vegetable oil: delivers extra moisture and keeps the muffins soft and fluffy choose neutral-flavored oil like canola or sunflower
- Eggs and additional egg yolk: add richness and help bind the batter use room temperature for smoothest mixing
- Full-fat cream cheese: creates the classic cheesecake swirl cut into cubes and bring to room temperature for easy blending
- Vanilla extract: deepens the flavor just a splash makes the muffins smell like bakery ones
- Pumpkin spice blend: brings the signature warmth you can make your own or use cinnamon and nutmeg in a pinch
- Baking soda and salt: balance sweetness and help with lift
- For extra flair: try pumpkin seeds or chopped pecans on top both look pretty and bring a bit of crunch
Step-by-Step Instructions
- Prepare Dry Ingredients:
- Whisk together flour pumpkin spice baking soda and salt in a medium bowl making sure no lumps remain This step is essential for evenly dispersing the spices and leaveners
- Mix Wet Ingredients:
- Combine pumpkin granulated sugar and brown sugar in a large bowl Whisk until well blended and smooth Beat in the eggs oil and vanilla until fully combined at this stage everything should look glossy
- Combine Wet and Dry:
- Gradually add the dry mixture to the wet mixture using a spatula or wooden spoon Stir gently just until the flour disappears taking care not to overwork the batter Fill muffin liners about three quarters full for best rise
- Make Cream Cheese Swirl:
- In a separate bowl beat cream cheese until creamy and smooth Add in sugar egg yolk and vanilla Beat again until completely blended and thick
- Swirl Cream Cheese:
- Place about one tablespoon of cream cheese mixture onto each unbaked muffin Using a toothpick gently swirl the cream cheese into the top surface Feel free to be artistic or just leave it as a dollop for a rustic look
- Bake:
- Bake muffins in a preheated oven at three fifty degrees Fahrenheit for eighteen to twenty minutes Muffins should spring back when gently pressed and a toothpick in the pumpkin section comes out mostly clean Let them cool in the tin for a few minutes before eating

The cream cheese swirl is my favorite part because it reminds me of baking cheesecake with my mom every Thanksgiving We would always save a little batter for muffins and now I get to pass on that tradition to my kids with this recipe
Storage Tips
Store cooled muffins in an airtight container at room temperature for up to two days For longer freshness keep them in the fridge up to five days Refrigeration helps keep the cream cheese swirl food safe These muffins also freeze very well Place in a freezer bag and thaw overnight
Ingredient Substitutions
If you do not have vegetable oil melted and cooled butter works too but will add a richer flavor For a lighter muffin substitute half of the flour for whole wheat or white whole wheat You can use all granulated sugar or all brown sugar based on what you have on hand Mascarpone can replace cream cheese for a slightly less tangy swirl
Serving Suggestions
Serve these muffins warm with a little butter for breakfast They also pair perfectly with coffee or spiced tea Try cutting them in half and adding a few fresh berries or a dusting of powdered sugar for brunch These make a fantastic snack for kids lunches or a cozy dessert after a weeknight dinner

Cultural Context
Pumpkin cream cheese muffins are a twist on both American pumpkin bread and cheesecake Classic pumpkin muffins have been an autumn favorite in North America for generations Swirling in cream cheese likely started with coffee shop bakers looking for a little extra wow These muffins are now beloved everywhere from family holidays to school bake sales
Frequently Asked Questions
- → How do I achieve a perfect cream cheese swirl?
For a defined swirl, use a toothpick to gently drag the cream cheese mixture through the muffin batter before baking.
- → Can I use homemade pumpkin puree?
Yes, just ensure your puree is as thick as canned and not too watery for best muffin texture and rise.
- → What can I substitute for vegetable oil?
Melted butter can replace oil for a richer taste, but oil yields a slightly moister crumb in these muffins.
- → Is it possible to freeze these muffins?
Absolutely. Cool completely, then wrap tightly and freeze for up to 2 months. Thaw at room temperature before serving.
- → Should the cream cheese be at room temperature?
Yes, softened cream cheese blends smoothly for a creamy, lump-free swirl in every muffin.
- → Can I add nuts or seeds?
Chopped pecans, walnuts, or pepitas make great additions—stir into the batter or sprinkle on top before baking.